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Stefan Wirtz - Researcher
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Stefan Wirtz

Researcher
University of Erlangen-Nuremberg • Erlangen • Germany

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • scRNA-seq analysis
Languages
  • English

Fields of interest

RNA-seq analysis
Aims at providing a functional annotation tool for the genetic variation, using…
Provides a collection of clustering similarity measures for all three…
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
Metagenomic sequencing analysis
Proposes an iterative approach to assembling metagenomic datasets. Spherical…
Allows users to profile viruses and eukaryotes. MICoP is a computational method…
Identifies conserved non-coding elements (CNEs) between two given DNA sequences…
scRNA-seq analysis
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Automatically combines transcriptomes from difference sources, such as assembly…
Corrects the bias in expression quantification without specifying the source or…