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Stefanie Graindorge - Analyst
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Stefanie Graindorge

Analyst
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • English
  • French
  • German
Programming languages
  • Perl
  • Python
  • Shell (Bash)

Fields of interest

De novo sequencing analysis
Enables gene-by-gene (GbG) analyses including building and validating novel…
Allows users to infer tumor progression which includes mutation losses from…
Exploits matrix factorization for gene prioritization. This method leans on an…
RNA-seq analysis
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Allows detection of collaborative transcription factor pairs. MMARGE consists…
Recognizes tissue-specific poly(A) sites (tsPAs) in plants. TSAPA is based on a…
ChIP-seq analysis
An indexing scheme to support sequence-based querying of terabyte-scale…
Simultaneously quantifies differences in differential transcription factor (TF)…
Performs computation of distance precision matrix and regularized distance…