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monica Steffi - M.Tech
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monica Steffi

Karunya University • Coimbatore • India

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • English
Programming languages
  • Python
  • R

Fields of interest

WGS analysis
Consists of a method for comparing trees whose labels belong to a pre-defined…
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
RNA-seq analysis
Allows users to return all read mappings within a given edit distance. FEM is…
Clusters and annotates contigs from de novo transcriptome assemblies. Grouper…
Reports candidate transposable elements (TEs) to be considered in downstream…
Metagenomic sequencing analysis
Allows to simulate the effects of reaction inhibition across different stages…
Infers automatically single-copy marker genes. ezTree is a computational…
Enables decomposition of a gene tree into trees consistent with a species tree.…