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Stella Paffenholz - Cancer Biology PhD Student
Open to new opportunities
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Open to new opportunities

Stella Paffenholz

Cancer Biology PhD Student
Memorial Sloan Kettering Cancer Center • New York City • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • R

Fields of interest

Genome edition
Assesses deep-sequencing data from clustered regularly interspaced short…
Creates and picks single-guide RNAs (sgRNAs) or template sequences for knockout…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
WGS analysis
Serves for cancer-related gene prioritization. MGOGP is an algorithm that can…
Generates a tiered report that will aid the interpretation of individual cancer…
Furnishes method for genotyping and characterizing short tandem repeats (STR)…
RNA-seq analysis
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Designs polymerase chain reaction (PCR) primers from DNA sequence.…
Assists users in pre-processing of read data. BLR is a library preparation…