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Itsuro Sugimura - Molecular biology, Microbiology
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Itsuro Sugimura

Molecular biology, Microbiology
Hokkaido university • Sapporo • Japan

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • Japanese
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Desktop
GOLabeler
Predicts functions of no-knowledge proteins, particularly for those in the…
Desktop
SpaRC
Enables large-scale metagenome and transcriptome reads clustering. SpaRC is an…
Desktop
NEPAL
Allows users to optimize a scoring function for pairwise-profile alignment…
RNA-seq analysis
Desktop
EnrichedHeatmap
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Desktop
FusorSV
Combines structural variation (SV) calls from different algorithms to reduce…
Desktop
NEPAL
Allows users to optimize a scoring function for pairwise-profile alignment…
Metagenomic sequencing analysis
Desktop
FusorSV
Combines structural variation (SV) calls from different algorithms to reduce…
Desktop
GROOT
Profiles resistome by using a variation graph representation of antibiotic…
Web
gamma-AM
Assists users to observe the potential function of new genes according to those…

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