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Itsuro Sugimura - Molecular biology, Microbiology
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Itsuro Sugimura

Molecular biology, Microbiology
Hokkaido University • Sapporo • Japan

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • Japanese
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Enumerates conserved blocks that are centered in small components of a given…
Simultaneously quantifies differences in differential transcription factor (TF)…
Serves as a fully automatic analysis of protein family conservation within a…
RNA-seq analysis
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Metagenomic sequencing analysis
Allows users to conduct large-scale comparisons of their results with thousands…
Contains a library to process over- and under-representation of certain gene…
Detects pathogens for both simulated and real diagnostic applications. PAIPline…