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Sukanta Mondal - Developer • Doctorate/PhD
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Open to new opportunities

Sukanta Mondal

Developer • Doctorate/PhD

Birla Institute of Technology and Science • Pilāni, India

Skills and expertise

Omics and technologies

  • RNA-seq analysis
  • Gene expression microarray analysis
  • Protein interaction analysis

Programming languages

  • Python

Languages

  • English

Tools maintained

LORIS

Desktop

LORIS / L1-regularized LOgistic Regression based protein-protein Interaction Sites predictor

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Identifies interaction residues, using sequence features and is implemented via the L1-logreg classifier. LORIS can predict proteins having different types of amino acid groups. With this tool, there…

PINGU

Desktop

PINGU / PredIction of eNzyme catalytic residues usinG seqUence information

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Assists users to perform catalytic residue predictions with improved precision by using physicochemical properties and evolutionary information from enzyme sequences. PINGU is construct around a…

MOWGLI

Desktop

MOWGLI / protein-MannOse interacting residues With ensemble classifiers usinG evoLutionary Information

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Assists users to identify mannose interacting residues using evolutionary information in an ensemble of random forest classifiers. MOWGLI is a program that can be used for predicting…

AFP-PseAAC

Desktop

AFP-PseAAC

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Assists users to detect antifreeze proteins (AFPs). The AFP-PseAAC consists of support vector machines-based predictor that uses Chou's pseudo amino acid composition for identifying AFP. This…

DORAEMON

Desktop

DORAEMON / conDitiOnal pRobabilistic Approach for idEntification of aMino acids interacting with ribONucleic acids

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Allows analysis and identification of protein-RNA interaction complexes. DORAEMON is based on a conditional probabilistic approach in a non-numeric feature space. It was designed to be applied in…

SPRINGS

Desktop

SPRINGS / Sequence-based predictor of PRotein-protein interactING Sites

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A computational approach using artificial neural networks for predicting protein-protein interaction sites based on evolutionary conservation, averaged cumulative hydropathy and predicted relative…