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Tatiana Vishnivetskaya - metagenomes of extreme environments
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Tatiana Vishnivetskaya

metagenomes of extreme environments
University Of Tennessee System • University of Tennessee at Knoxville • Knoxville • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • Russian
Programming languages
  • Shell (Bash)

Fields of interest

WGS analysis
Constructs short sequence read sets for thousands of spike-in variants that…
Provides a high-risk pedigrees (HRP) method. SGS recognizes segregating…
Provides several tools for processing phylogenetic. Gappa can automatically…
De novo sequencing analysis
Allows users to identify branchpoints throughout the human genome thanks to…
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
Combines structural variation (SV) calls from different algorithms to reduce…
Metagenomic sequencing analysis
Allows microbial metataxonomic investigation. BTW is composed of a set of tools…
Estimates species trees given a set of rooted gene trees. DynaDup is based on…
Determines underlying microbial community structures and associations between…