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Amanda Teixeira de Melo - Cryptococcus biology
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Amanda Teixeira de Melo

Cryptococcus biology
Federal University of Sao Paulo • São Paulo • Brazil

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • MS-based untargeted proteomics
Languages
  • English
  • Portuguese

Fields of interest

Genome edition
Estimates candidate microhomologymediated end joining (MMEJ) loci. MENTHU…
Examines and evaluates sequencing reads from clustered regularly interspaced…
Performs analysis, visualization and comparison of sequencing data from genome…
RNA-seq analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Aims to infer causal graphs. MRPC is a machine learning algorithm that…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
MS-based untargeted proteomics
Provides a reproducible pipeline to analyse isobarically labelled mass…
Predicts liquid chromatography (LC) retention behavior of molecules. ‘retention…
Allows protein identification with robust peptide mass fingerprinting (PMF)…