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Teresa Shippy - Bioinformatics Specialist
Open to new opportunities
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Open to new opportunities

Teresa Shippy

Bioinformatics Specialist
Kansas State University • Manhattan • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • aCGH data analysis
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Provides a deep neural network base caller for nanopore sequencing. Chiron…
Filters out single nucleotide polymorphism (SNP) events caused by recombination…
Provides a library written in Nim programming language that suits for simple…
RNA-seq analysis
Serves to improve RNA-seq read alignment. iMapSplice processes by performing an…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Contains a library to process over- and under-representation of certain gene…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Combines several steps for a high-quality probe and primer design for a variety…