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Theo Dreher - Genomics of bloom-forming cyanobacteria
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Theo Dreher

Genomics of bloom-forming cyanobacteria
Oregon State University • Corvallis • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
Languages
  • English

Fields of interest

WGS analysis
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
Simulates targeted capture sequencing data. CapSim simulates the dynamics of…
Identifies non-tandem repeats and enables analysis of mitochondrial sequences…
Metagenomic sequencing analysis
Provides an online platform for collecting, managing, analyzing, visualizing…
Designs probe sets for whole genome capture of highly diverse target sequences…
Classifies protein sequence and identifies remote protein homology via…
Protein interaction analysis
Learns protein-RNA binding preferences and predicts novel interactions. DLPRB…
Detects sequence-structure binding motifs from large sets of RNA sequences.…
Discovers combinatorial gene-drug modules. HOGMMNC includes prior information…