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Tiago Isabelinho - Comparative genomics
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Tiago Isabelinho

Comparative genomics
University of Minho • Braga • Portugal

Skills and expertise

Fields of interest
  • WGS analysis
  • Metagenomic sequencing analysis
  • aCGH data analysis
Languages
  • English
  • Portuguese
Programming languages
  • Python

Fields of interest

WGS analysis
Provides a simulation tool of single nucleotide polymorphism (SNP) clusters for…
Allows long read alignment to large reference genomes by splitting the index…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
Metagenomic sequencing analysis
Optimises the agreement between gene models for orthologous genes in multiple…
Enables phylogenetically informed classification of metagenomic sequences.…
Enables identification of near full-length 16S rRNA gene sequences in microbial…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Combines several steps for a high-quality probe and primer design for a variety…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…