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Timothy de Wet - Grad Student studying TB
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Timothy de Wet

Grad Student studying TB
University of Cape Town • Rondebosch • South Africa

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • SPIM
Languages
  • English
Programming languages
  • Java
  • Python
  • R

Fields of interest

De novo sequencing analysis
Allows users to provide simulations about evolution of bacterial genomes in…
Registers and associates the barcode data required to order and orient draft…
Allows users to deduce E-P links based on correlated activity patterns across…
RNA-seq analysis
Provides a platform to build reproducible and flexible pipelines for scalable…
Identifies optimal number of clusters while partitioning data. Shrinkage…
Simplifies the execution of existing short read aligners (SRA) on…
SPIM
Mimics wave-optical image formation in light-sheet microscopes. Biobeam…
Enables high speed three-dimensional imaging of large samples at high…
Allows users to perform image-based hemodynamics simulation. SimVascular is an…