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Toshihide Hirao - Molecular Ecology
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Toshihide Hirao

Molecular Ecology
University of Tokyo • Tokyo • Japan

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • Japanese
Programming languages
  • Perl
  • R

Fields of interest

WGS analysis
Enables decomposition of a gene tree into trees consistent with a species tree.…
Identifies inherited meiotic recombination (MR) events. MRLR is a pipeline that…
Suits for automated pipeline optimization. ToTem enables the integration of a…
RNA-seq analysis
Consists of a script that constructs a database using the ClinVar XML files.…
Consists of a supervised learning approach to integrate expression quantitative…
Finds differentially expressed (DE) genes that avoids some of the shortcomings…
Metagenomic sequencing analysis
Automates the discovery of chemical organizations, and conducts a quantitative…
Consists of an alignment-free functional binning and abundance estimation…
Assists users in building, editing, simulating, and interpreting macromolecular…