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Toth Reka - epigenomics bioinformatics
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Toth Reka

epigenomics bioinformatics
Helmholtz Association of German Research Centres • German Cancer Research Center • Heidelberg • Germany

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • DNA methylation array analysis
Languages
  • English
Programming languages
  • Python
  • R

Fields of interest

RNA-seq analysis
Simplifies the execution of existing short read aligners (SRA) on…
Integrates multi-omics profiles for phenotype prediction. iOmicsPASS utilizes…
Provides an estimation of transposable elements (TE) expression resolved to…
BS-seq analysis
Serves for the analysis of whole genome bisulfite sequencing (WGBS) data and…
Allows users to filter, convert and combine multiple data files produced by…
Predicts de novo profile generation based on sequence context. SPBuild…
DNA methylation array analysis
Enables to build custom genome browsers. GIVe is a programming library allowing…
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Enables the application of gene set tests (GST) in the absence of large parts…