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Tristan Lefebure

University of Lyon System • Lyon • France

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • French
Programming languages
  • Perl

Fields of interest

De novo sequencing analysis
Retrieves coding regions of mt genomes from RNA-seq data. Trimitomics proposes…
Examines epigenomic and transcriptomic next generation sequencing (NGS) data.…
Exploits matrix factorization for gene prioritization. This method leans on an…
RNA-seq analysis
Allows inference of hub graphical models from high-dimensional data. DWLasso…
Provides a wide range of descriptors of transcript quality and generates a…
Performs alignments to fusion and non-fusion gene constructs simultaneously.…
Metagenomic sequencing analysis
Deduces phylogenetic in the human immunodeficiency virus (HIV) drug resistance…
Consists of a codon-correct alignment and genome annotation tool. VIRULIGN…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…