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Sarah Turner - Mrs.
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Sarah Turner

Mrs.
University of Illinois System • University of Illinois at Chicago • Chicago • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Python

Favorites and Collections

Favorites

STAMP
Desktop
MetaComp
Desktop

Collections

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Reviews and Discussions

LATEST REVIEWS

MetaBAT 2018-01-30, 20:35:18
I think this is a useful and easy-to-use tool. However, it did not perform well with samples containing a large number of unknown/unidentified organisms (freshwater sediment), and may be more useful…
CheckM 2017-11-06, 18:01:19
I have found this tool extremely useful for evaluating bins created by various binning tools (MetaBAT, MaxBin, and MyCC are the ones I've used the most). It's very good for getting a…

LATEST DISCUSSIONS

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Fields of interest

De novo sequencing analysis
Maps ethyl methanesulfonate (EMS)-induced mutations in forward genetic screens…
Examines cis-regulatory modules (CRM) and cis-regulatory elements (CRE). EDCC…
Assists users to observe the potential function of new genes according to those…
RNA-seq analysis
Allows users to optimize a scoring function for pairwise-profile alignment…
Enables multi-species orthology inference. SonicParanoid is a program that…
Enables the application of gene set tests (GST) in the absence of large parts…
Metagenomic sequencing analysis
Serves for visual knowledge exploration in molecular interaction networks. This…
Allows users to discover a family of binary/ternary/ratio (BTR) models with…
Provides a library written in Nim programming language that suits for simple…