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Ulf Schmitz - Computational workflows to study gene regulation
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Ulf Schmitz

Computational workflows to study gene regulation
Centenary Institute of Cancer Medicine and Cell Biology • Sydney • Australia

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

RNA-seq analysis
Identifies high-risk individuals for cancers based on their germline genomic…
Enables network discovery from perturbed expression data. This approach…
Creates disjoint segments of reference transcriptomes amenable for…
Gene expression array analysis
Stores projects and creates a directory of analysed results and parameter.…
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Protein interaction analysis
Models signaling networks from perturbation data. STASNet is a computational…
Models peptide conformations and sequent global sampling of binding…
Computes small molecules’ torsional potential energies. H-TEQ can be used for…