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Matt Van de Graaf - N/A
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Matt Van de Graaf

N/A

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • MATLAB
  • R

Fields of interest

RNA-seq analysis
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Maps a read against a reference region if and only if its estimated alignment…
Gene expression array analysis
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Contains a library to process over- and under-representation of certain gene…
Consists of a dimension reduction technique designed for complex data sets with…
Protein interaction analysis
Predicts missing links in any given bipartite network. Netpredictor provides…
Provides a method for predicting essential proteins. TEO is an algorithm that…
Allows users to select characteristics from multi-omics data. CCAFS is a…