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Virginia Mara Wagatsuma - postdoc
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Virginia Mara Wagatsuma

postdoc
University of Sao Paulo • São Paulo • Brazil

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • English
  • Portuguese
Programming languages
  • R

Fields of interest

WGS analysis
Calculates average amino-acid identity (AAI) between a query proteome and all…
Serves as a fully automatic analysis of protein family conservation within a…
Offers a pipeline tool for post-processing structural variant calls. MAVIS…
RNA-seq analysis
Creates disjoint segments of reference transcriptomes amenable for…
Provides a platform to build reproducible and flexible pipelines for scalable…
Optimises the agreement between gene models for orthologous genes in multiple…
BS-seq analysis
Allows users to perform quality control (QC) and diagnostic analyses of…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Filters spurious variants caused by mouse reads in patient-derived xenografts…