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Vitor C. Piro - Metagenomics
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Vitor C. Piro

Metagenomics
Robert Koch Institute • Berlin • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Python
  • Shell (Bash)

TOOLS MAINTAINED

genome_updater

Desktop

genome_updater

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Provides an automatic download and update genome and sequences files from NCBI. genome_updater is a Shell script that keeps log and version for each update.

FGAP

Web
Desktop

FGAP

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An efficient tool to find regions to fill gaps of draft genome sequences. FGAP demands low computational resources, the results can be easily analyzed by the output generated, and it can be used for…