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Jakob Willforss - Developing software for quantitative proteomics.
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Jakob Willforss

Developing software for quantitative proteomics.
Lund University • Lund • Sweden

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • MS-based untargeted proteomics
  • NMR-based proteomics analysis
Languages
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Identifies genetic variants that overlap with genes coding for lincRNA or miRNA…
Deduces gene regulations by exploiting time-series gene expression data.…
Visualizes balances of compositional data using an alternative to the balance…
MS-based untargeted proteomics
Allows protein identification with robust peptide mass fingerprinting (PMF)…
Plots and overlays interactive 2D maps from deconvoluted liquid chromatography…
Provides post-processing of peptide-to-spectrum matches (PSMs) by machine…
NMR-based proteomics analysis
Automates the elimination of noise peaks. Filt Robot employs convolutional…
Assists users to perform spectra analysis. Dumpling comprises the following…
Performs general ensemble-based validation step and a simple and…