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Wytze Gelderloos - Using ITIS to infer TE locations in tomato
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Wytze Gelderloos

Using ITIS to infer TE locations in tomato
Wageningen University & Research • Wageningen • Netherlands

Skills and expertise

Fields of interest
  • Immune system analysis
  • RNA-seq analysis
  • DNA methylation array analysis
Languages
  • English
Programming languages
  • Java
  • Python
  • Shell (Bash)

Favorites and Collections

Favorites

ITIS
Desktop

Collections

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Fields of interest

Immune system analysis
Enables users to predict of epitope-specific T-cell receptor (TCR) sequences.…
Provides a means to model T cell receptors (TCRs) structures from sequence.…
Allows users to perform antibody library screening. TrueRepertoire is a…
RNA-seq analysis
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Optimises the agreement between gene models for orthologous genes in multiple…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
DNA methylation array analysis
Proceeds quality control, normalizes and performs epigenome-wide association…
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
Consists of a genomic context explorer. GeneSpy is a program that aims to…