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Xiaoyuan Zhou - Microbiome
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Xiaoyuan Zhou

Microbiome
University of California System • University of California, San Francisco • San Francisco • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression array analysis
Languages
  • Chinese
  • English
Programming languages
  • Perl
  • R

Fields of interest

RNA-seq analysis
Combines structural variation (SV) calls from different algorithms to reduce…
Supports the validation of experiments by annotating variants and prioritizing…
Allows users to compare genomic structures and annotations across multiple…
Metagenomic sequencing analysis
Determines underlying microbial community structures and associations between…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Gene expression array analysis
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Gathers investigations of phytohormone responses. GSHR employs the integration…
Allows users to perform class discovery. M3C is based on a reference-based…