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Xu-Kai Ma - RNA-seq analysis
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Xu-Kai Ma

RNA-seq analysis
Max Planck Society • CAS-MPG Partner Institute for Computational Biology • Shanghai • China

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • scRNA-seq analysis
  • Chinese
Programming languages
  • Python

Fields of interest

RNA-seq analysis
Permits users to classify reads into barcode bins using the raw read signal.…
Serves as a fully automatic analysis of protein family conservation within a…
Offers an approach for quantifying transposable elements (TEs) from next…
ChIP-seq analysis
Offers a support for biological data mining using the Medical Subject Headings…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
scRNA-seq analysis
Recovers the true expression level of each gene in each cell. SAVER is based on…
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Permits researchers to conduct investigation and construct high-quality…