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YING SUN - Marine Microbial Evolution
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YING SUN

Marine Microbial Evolution
Chinese University of Hong Kong • Sha Tin • Hong Kong

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • Chinese
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

WGS analysis
Detects and visualizes mutations in a given file. MutScan creates read pile-up…
Supplies a set of features dedicated to quality check (QC) of next generation…
Exploits independent genome wide associations studies (GWAS) in multiple traits…
De novo sequencing analysis
Allows users to forecast footprints with a specific focus on ATAC-seq protocol.…
Predicts de novo profile generation based on sequence context. SPBuild…
Allows users to preserve the inter-position dependencies and includes the…
Metagenomic sequencing analysis
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Provides a toolkit to analyze and visualize protein domain architectures. HCA…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…