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Yanni Dong

Massey University • Palmerston North • New Zealand

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Protein interaction analysis
  • Chinese
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Refines regulatory motifs. LMMO consists of a large-margin-type algorithm that…
Simplifies the execution of existing short read aligners (SRA) on…
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…
RNA-seq analysis
Generates and analyzes executable models from single-cell gene expression data.…
Provides a method for inferring transmission events. BadTrIP models evolution…
Classifies biological sequences based on the feature extraction from complex…
Protein interaction analysis
Assists users to estimate concentration dependent plasma binding capacity of…
Simplifies the utilization of molecular dynamics (MD) in drug discovery. BiKi…
Models signaling networks from perturbation data. STASNet is a computational…