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Yidan Sun - RNA-seq
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Yidan Sun

RNA-seq

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • Chinese
Programming languages
  • R

Fields of interest

WGS analysis
Deduces relative copy number (RCN) alterations at each locus from FAST-SeqS…
Estimates the breed ancestry of crossbred cattle using high-density single…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
RNA-seq analysis
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Aligns raw reads directly against redundant databases. KMA is an alignment…
Stores projects and creates a directory of analysed results and parameter.…
ChIP-seq analysis
Combines structural variation (SV) calls from different algorithms to reduce…
Creates gene networks for a target sample in both dense and sparse region.…
Simplifies the execution of existing short read aligners (SRA) on…