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Xiaojie Zhang - bioinformatics engineer
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Xiaojie Zhang

bioinformatics engineer
Berry Genomics  • China

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • Chinese
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Integrates predictions of several popular scores (SIFT, Polyphen-2, LRT,…
Simulates the entire procedure of Nanopore sequencing. DeepSimulator can mimic…
Infers automatically single-copy marker genes. ezTree is a computational…
De novo sequencing analysis
Simplifies the execution of existing short read aligners (SRA) on…
Corrects long read hybrid errors. HG-CoLoR combines both (i) the idea to…
Estimates species trees given a set of rooted gene trees. DynaDup is based on…
aCGH data analysis
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Analyzes next-generation sequencing (NGS) from experiments using unique…
Combines several steps for a high-quality probe and primer design for a variety…