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Zhang Xiaoxi - Genomic function
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Zhang Xiaoxi

Genomic function
Chinese Academy of Sciences • Institute of Oceanology • Qingdao • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • Chinese
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

De novo sequencing analysis
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Evaluates a phylogeny using a root-to-tip approach to define sub-lineages…
Allows users to detect motifs within large sequence sets. PEnG-motif is an open…
RNA-seq analysis
Serves as a hybrid multiobjective memetic metaheuristic for multiple sequence…
Provides next-generation sequencing (NGS)-based expression profiles and tools…
Enables visualization, exploration of genes and cancers, and pinpointing of…
Gene expression array analysis
Classifies protein sequence and identifies remote protein homology via…
Allows detection of a subset of transcriptomic or methylomic residues. TriVote…
Aims to characterize non-model organisms. IDP-denovo allows users to handle…