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alexis groppi - Bioanalyst
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alexis groppi

Bioanalyst
University of Bordeaux • Bordeaux • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • English
  • French

Fields of interest

WGS analysis
Genotypes normal and expanded tandem repeats (TRs) from next-generation…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
Provides new method for genetic studies. This extension of lme4 unlocks the…
De novo sequencing analysis
Assists users for visualizing ancestry data. AncestryView first proceeds by…
Processes raw reads to count tables for RNA-seq data using Unique Molecular…
Consists of a codon-correct alignment and genome annotation tool. VIRULIGN…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Analyzes next-generation sequencing (NGS) from experiments using unique…