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andres lopez

msc
Universidad Católica de Manizales • Manizales • Colombia

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
Languages
  • English
  • Spanish
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Discovers the mean in a partition distribution. mean_partition is based on an…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Metagenomic sequencing analysis
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Clarifies detailed evolutionary relationships between gene clusters. CORASON…
Protein interaction analysis
Deduces target gene expression profiles using a conditional generative model.…
Enables the simplification and compression of graphs based on high frequency…
Allows the extraction of protein-protein interactions (PPIs) including…