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annacsalvador - Graduate Research Assistant
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annacsalvador

Graduate Research Assistant
Texas A&M University System • Texas A&M University • College Station • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • R

Fields of interest

Genome edition
Serves as a calculation and visualization tool for high-throughput CRISPR…
Performs analysis, visualization and comparison of sequencing data from genome…
Creates and picks single-guide RNAs (sgRNAs) or template sequences for knockout…
RNA-seq analysis
Identifies novel 3’ Untranslated Transcribed Region (UTR) and 3’ UTR…
Enables the application of gene set tests (GST) in the absence of large parts…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Metagenomic sequencing analysis
Offers a powerful approach for metagenomic profiling of antibiotic resistance…
Permits to identify the “core microbiome” associated with a given habitat.…
Identifies and quantifies the abundance of viruses in metagenomics data.…