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apzlo - Bioinformatics of pulmonary diseases
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apzlo

Bioinformatics of pulmonary diseases
University of Iowa • Iowa City • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • scRNA-seq analysis
Languages
  • English
  • Italian
  • Spanish
Programming languages
  • R

Fields of interest

Genome edition
Estimates candidate microhomologymediated end joining (MMEJ) loci. MENTHU…
Examines and evaluates sequencing reads from clustered regularly interspaced…
Performs analysis, visualization and comparison of sequencing data from genome…
RNA-seq analysis
Provides an online platform for normalization, calculation of performance…
Allows detection of collaborative transcription factor pairs. MMARGE consists…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
scRNA-seq analysis
Provides an online platform for normalization, calculation of performance…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Allows users to process ChIP-seq data sets from raw reads to accurate…