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arquivos trabalho

University of Sao Paulo • São Paulo • Brazil

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • De novo sequencing analysis
  • Portuguese
Programming languages
  • R

Fields of interest

Genome edition
Examines and evaluates sequencing reads from clustered regularly interspaced…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
WGS analysis
Clusters variants into clones. QuantumClone applies an expectation-maximization…
Leverages genetic information for imputing rice datasets. Rice Imputation…
Aims to represent a family of aligned protein sequences or a collection of…
De novo sequencing analysis
Applies an information theoretic approach for effective feature mining and…
Estimates multiple sequence annotations of continuous sequence elements (CSE)…
Enables large-scale metagenome and transcriptome reads clustering. SpaRC is an…