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Arup Ghosh - Bioinformatician • Master's degree
Open to new opportunities
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Open to new opportunities

Arup Ghosh

Bioinformatician • Master's degree

Ministry of Science and Technology • Institute of Life Sciences • Bhubaneshwar, India

Working on Immunology and Systems Biology.

QC

NGS data quality control.

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FastQC
Desktop

FastQC

Furnishes functions to control quality for high throughput sequence data.…

Furnishes functions to control quality for high throughput sequence data. FastQC aims to provide a simple manner to do some quality control checks on raw sequence data coming from high throughput…

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FASTX-Toolkit
Desktop

FASTX-Toolkit

A collection of command line tools for Short-Reads FASTA/FASTQ files…

A collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. Next-Generation sequencing machines usually produce FASTA or FASTQ files, containing multiple short-reads sequences…

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Trimmomatic
Desktop

Trimmomatic

Performs a variety of trimming tasks for Illumina paired-end and single ended…

Performs a variety of trimming tasks for Illumina paired-end and single ended data. Trimmomatic is a pair-aware preprocessing tool optimized for Illumina next-generation sequencing (NGS) data. The…

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MultiQC
Desktop

MultiQC

A tool to create a single report visualizing output from multiple tools across…

A tool to create a single report visualizing output from multiple tools across many samples, enabling global trends and biases to be quickly identified. MultiQC allows accurate comparison between…