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ayten ucar

student
Yıldız Technical University • Istanbul • Turkey

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English

Fields of interest

RNA-seq analysis
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Provides an estimation of transposable elements (TE) expression resolved to…
Performs computation of distance precision matrix and regularized distance…
BS-seq analysis
Assists users in analyzing next-generation sequencing (NGS) data. snakePipes…
Combines structural variation (SV) calls from different algorithms to reduce…
Enables genotyping and variant annotation of resequencing data produced by…
Metagenomic sequencing analysis
Gathers DNA sequences via clustering. STARS uses K-means algorithm and GSP…
Provides a tool to select the band width according to the read’s error rates.…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…