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brindangnanam p - metagenomics
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brindangnanam p

metagenomics
Pondicherry University • Puducherry • India

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • R

Fields of interest

De novo sequencing analysis
Enables distributed, likelihood-free inference for computationally demanding…
Serves for the deconvolution of read-depth information and inferred the…
Permits users to test gene-set enrichment directly from de novo (DN) and rare…
RNA-seq analysis
Enables multi-species orthology inference. SonicParanoid is a program that…
Predicts functions of no-knowledge proteins, particularly for those in the…
Enables cancer subtype classification. NBS2 is an application which is based on…
Metagenomic sequencing analysis
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Serves for visual knowledge exploration in molecular interaction networks. This…
Indexes very large and repetitive references to align short reads to them very…