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danielecook - Bioinformatician
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danielecook

Bioinformatician
Northwestern University • Evanston • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

Genome edition
Estimates candidate microhomologymediated end joining (MMEJ) loci. MENTHU…
Examines and evaluates sequencing reads from clustered regularly interspaced…
Performs analysis, visualization and comparison of sequencing data from genome…
WGS analysis
Enables linkage disequilibrium (LD) decay analysis. PopLDdecay allows…
Discovers the mean in a partition distribution. mean_partition is based on an…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
RNA-seq analysis
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Assists users for annotating transcriptome and functional analysis of…
Enables exploration and classification of large collections of gene clusters.…