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davide.prandi - WGS and WES clonality analysis
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davide.prandi

WGS and WES clonality analysis
University of Trento • Trento • Italy

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
Languages
  • English
  • Italian
Programming languages
  • C++
  • R

Fields of interest

WGS analysis
Hierarchizes master regulators (MRs) in human cancer. MR4Cancer is a web…
Provides inference of gene regulations using eQTLs as causal anchors by…
Provides a library written in Nim programming language that suits for simple…
WES analysis
Allows users to preserve the inter-position dependencies and includes the…
Performs genome-wide prioritizations. Scuba prioritizes from candidate genes…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
RNA-seq analysis
Performs detection of RNA-seq differential expression (DE). RoMA is a DE…
Predicts isoform expression on entirely held-out libraries. APARENT is a…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…