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dhondalay - sequencing data analysis
Open to new opportunities
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Open to new opportunities

dhondalay

sequencing data analysis
Stanford University • Stanford • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • MS-based untargeted metabolomics
Languages
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

RNA-seq analysis
Provides an online platform for normalization, calculation of performance…
Allows detection of collaborative transcription factor pairs. MMARGE consists…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
Metagenomic sequencing analysis
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Discovers, delineates and structures metagenomic species pangenomes (MSPs) from…
MS-based untargeted metabolomics
Identifies metabolites from untargeted liquid chromatography-mass spectrometry…
Provides a web server of in silico metabolization of metabolites. MetWork is an…
Measures parsimonious metabolic networks for generating metabolites. GridProd…