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HuGeF • Italy

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Tools maintained by Danny Incarnato

G T A T C G C T A
RNA Framework
Desktop

RNA Framework

Deals with RNA structure probing and post-transcriptional modifications mapping…

Deals with RNA structure probing and post-transcriptional modifications mapping high-throughput data. RNA Framework is a modular toolkit. Its main features are (i) automatic reference transcriptome…

G T A T C G C T A
Spats
Desktop

Spats

Processes reads and calculates SHAPE reactivities for SHAPE-Seq experiments on…

Processes reads and calculates SHAPE reactivities for SHAPE-Seq experiments on multiple RNAs. The Spats package implements a read mapping and reactivity analysis pipeline for calculating SHAPE-Seq…

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