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Elmar Pruesse


Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • English
  • German
Programming languages
  • C
  • C++
  • Cython
  • Java
  • Javascript
  • Lisp
  • Perl
  • PHP
  • Python
  • R
  • Ruby
  • Shell (Bash)

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Fields of interest

WGS analysis
Identifies and prioritises causal genes of loci associated with human disease.…
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Combines structural variation (SV) calls from different algorithms to reduce…
De novo sequencing analysis
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Predicts effectors in oomycete genomes, or with custom scripts for any genome.…
Assists users in pre-processing of read data. BLR is a library preparation…
Metagenomic sequencing analysis
Maps ethyl methanesulfonate (EMS)-induced mutations in forward genetic screens…
Allows for reproducible, higher-resolution comparisons across studies.…
Focuses on solving the target control problem. This method is based on an…