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fab mat

breeder

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • French

Fields of interest

WGS analysis
Allows analysis of sequence variants. OVAS is designed for annotating and…
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
De novo sequencing analysis
Validates scaffolding methods. Repeat aware scaffolding evaluation framework is…
Finds transpositions given the alignments of second generation reads to a…
Enumerates conserved blocks that are centered in small components of a given…
aCGH data analysis
Analyzes next-generation sequencing (NGS) from experiments using unique…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Combines several steps for a high-quality probe and primer design for a variety…