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farzad soleimani

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Tabriz University of Medical Sciences • Tabriz • Iran

Skills and expertise

Fields of interest
  • Genome edition
  • ChIP-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • R

Fields of interest

Genome edition
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
Serves as a calculation and visualization tool for high-throughput CRISPR…
ChIP-seq analysis
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Calls peaks in ChIP-seq data with biological replicates. BinQuasi jointly…
Permits to study the dynamical features of gene regulatory circuits without the…
Gene expression array analysis
Permits cluster identification using ensemble clustering. diceR assists users…
Searches specific gene expression pattern from time-series gene expression data…
Reproduces Gaussian clusters. Clusterlab is a customizable package, able to…