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Frankie James - Bioinformatics
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Frankie James

Bioinformatics
University of Southern California • Los Angeles • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Creates peptide wheel and net projections. NetWheels is a web server that draws…
Aims at providing a functional annotation tool for the genetic variation, using…
Allows analysis of sequence variants. OVAS is designed for annotating and…
RNA-seq analysis
Provides a sparse network component analysis algorithm. SparseNCA is a two…
Searches specific gene expression pattern from time-series gene expression data…
Cluster-select the optimal number of clusters and removes outlier objects.…
ChIP-seq analysis
Serves for Illumina short read sequencing data. PriLive allows users to remove…
Predicts cell-type specificity of a transcription factors (TFs) binding site…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…