Skills and expertise
Fields of interest
- WGS analysis
- De novo sequencing analysis
- aCGH data analysis
Languages
- English
- French
Programming languages
- Perl
- Shell (Bash)
Favorites and Collections
Reviews and Discussions
LATEST REVIEWS
BWA
2017-11-06, 11:18:56
We use BWA on a daily-basis and its results are always reliable and trustable.
We tested it in ALN/SAMPE legacy version and in MEM, and used those two versions depending the objectives.
The options…
LATEST DISCUSSIONS
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Bioinformatics projects
TOOLS MAINTAINED
LTRclassifier
Classifies plant long terminal repeat (LTR) retrotransposons in their respective superfamily, and provides automatically a basic functional annotation of these elements. LTRclassifier was tested on…
TOGGLE / TOolbox for Generic nGs anaLysEs
Enables users to design pipelines that manage large sets of next-generation sequencing (NGS) softwares and utilities. TOGGLE generates pipelines for largescale second- and third-generation sequencing…
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