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freddy pradeep - Bio-informatician
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freddy pradeep

Vellore Institute of Technology University • Vellore • India

Skills and expertise

Fields of interest
  • WGS analysis
  • MS-based untargeted proteomics
  • Protein interaction analysis
  • English
Programming languages
  • Java
  • Python
  • R

Fields of interest

WGS analysis
Identifies high-risk individuals for cancers based on their germline genomic…
Measures the evidence of aggregate-level pleiotropic association and estimates…
Assists users in searching somatic copy number alterations in whole genome…
MS-based untargeted proteomics
Assists users in open modification spectral library searching. ANN-SoLo is a…
Assists users with spectral library combination. iSwathX is an automated…
Implements algorithms for exploiting the retention time information in de novo…
Protein interaction analysis
Determines the human Pumilio protein PUM2 occupancy on any RNA sequence.…
Offers a toolbox dedicated to the valuation of gene regulatory networks (GRNs).…
Identifies network motif modules in integrated gene regulatory networks in…