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강지희 - Microbiology
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Atogen • Daejeon • Republic of Korea

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • MS-based untargeted metabolomics
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Integrates predictions of several popular scores (SIFT, Polyphen-2, LRT,…
Makes base calls in low coverage regions. PBHoover is a consensus and…
Infers automatically single-copy marker genes. ezTree is a computational…
Metagenomic sequencing analysis
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Determines and ranks low coverage and highly divergent viruses into metagenomic…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
MS-based untargeted metabolomics
Provides a package for metabolic modeling of microbial communities. Micom…
Investigates metabolites and their combinations in diseases. The program is…
Allows users to perform Two Dimensional Gas Chromatography-Mass Spectrometry…