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genomeCAT - data analysis
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data analysis
Max Planck Society • Max Planck Institute for Molecular Genetics • Berlin • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • ChIP-seq analysis
  • aCGH data analysis
  • English
  • German
Programming languages
  • Java
  • Perl
  • R

Bioinformatics projects

Fields of interest

WGS analysis
Identifies copy number variants (CNVs) within targeted next generation…
Displays interactive mining of complex neuroimaging genomics data. Genome…
Allows copy number variation (CNV) detection. iCNV can be applied in whole…
ChIP-seq analysis
Identifies transcription factors (TF) binding sites by combining bidirectional…
Allows detection of collaborative transcription factor pairs. MMARGE consists…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…