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girolamo_giudice - Bioinformatics e
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Bioinformatics e
European Molecular Biology Laboratory • European Bioinformatics Institute • Cambridge • United Kingdom

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • MS-based untargeted proteomics
  • Protein interaction analysis
  • English
  • Italian
  • Spanish
Programming languages
  • C
  • Javascript
  • Python
  • R

Fields of interest

RNA-seq analysis
Quantifies and displays all the clusters formed by the genes, given a list of…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Calculates the normalizing factors for zeroinflated sequencing data such as…
MS-based untargeted proteomics
Performs comprehensive in silico analyses. LeTE-fusion gives an ideal…
Integrates mass spectrometry (MS) data from the intact protein and glycopeptide…
Identifies cross-linked peptides with maximum paired scores in a protein…
Protein interaction analysis
Predicts protein-ligand absolute affinity based on 3D-convotional neural…
Analyzes co-regulatory patterns in any group of human proteins. CoExpresso is…
Analyzes multiple gene co-expression networks associated with cancer…